Functional Annotation
These apps allow users to import and utilize external genome annotations that can be combined with annotations created by KBase apps such as DRAM, Prokka, or RASTtk.
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These apps allow users to import and utilize external genome annotations that can be combined with annotations created by KBase apps such as DRAM, Prokka, or RASTtk.
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Enables upload of third-party annotations like EC and KEGG into KBase.
: Enables upload of third-party annotations to add to an existing genome into KBase in bulk.
: Compare and contrast metabolic annotations from multiple sources.
: Generate a consensus annotation by combining multiple annotation sources.
These apps take with annotations as input. See for more on annotating genomes.
– provides an example using a Streptomyces coelicolor strain A3(2) and annotations created in KBase and 3rd party tools.
Created and made available by Patrik D'haeseleer of Lawrence Livermore National Laboratory.
and – provide guidance through related workflows.
These apps were developed as part of the Biofuels and Bioenergy SFA. To learn more about this collaboration, see: .