Cannot connect to URL: ftp://ftp.imicrobe.us. ...
Invalid FTP Link: ...
Invalid Google Drive Link ...
(2, No such file or directory)
(2, No such file or directory)
SRA input file type selected. But missing SRA file
Invalid FASTQ file ...
Error running command: /kb/deployment/bin/fastq-dump ...
Error running command:pigz ...
Both SRA and FASTQ/FASTA file given.
Same file [XXX.XXXX.gz] is used for forward and reverse. Please select different files and try again.
File /kb/XXX.fasta is not a FASTQ file
Invalid FASTQ file
tr -d '\015' < 1.fastq >cleaned_1.fastq
Reading FASTQ record failed - non-blank lines are not a multiple of four.
Interleave failed - reads files do not have an equal number of records….
Deinterleave failed - line count is not divisible by 8
Object 1: Illegal character in object name
There are no contigs to save, thus there is no valid assembly.
The FASTA header key XXX appears more than once in the file
This FASTA file has non nucleic acid characters
This FASTA file may have amino acids in it instead of the required nucleotides.
FASTQ/FASTA input file type selected. But missing FASTQ/FASTA file
(\utf-8\, b\PK\x03\x04\x14\x00\x08…….
Duplicate gene ID: XXXX_xxxx
The input directory does not have any files with one of the following extensions .gbff,.gbk,.gb,.genbank,.dat,.gbf
XXX is not a valid KBase taxon ID
Every feature sequence id must match a fasta sequence id
unable to parse >.....
Features must be completely contained within the Contig in the Fasta file.
Starch.csv" is not a valid EXCEL nor TSV file
data file 4.xml either does not use commas or tabs as a separator
No object with name _Nostoc_azollae__0708
Error running command:pigz ...