Running Common Workflows

User guides on how to run different workflows in KBase.

Here is an example outline of the major workflows and datatypes in KBase. Common workflows include genome assembly and annotation, comparing genomes through taxonomy, sequence analysis, metabolic modeling, transcriptomics and expression analysis, viral analysis, and community analysis through metagenomics.

Examples of common analysis workflows in KBase

Find example workflows here:

1. Assembling & Annotating Microbial Genomes

2. Comparative Genomics & Phylogenetic Analysis

3. Constructing Metabolic Models

4. Metagenomic & Community Analysis

5. RNAseq & Expression Analysis

6. Samples & Metadata